Charleston and Steel's recurrence conjecture for ancestral sequence reconstruction
Let ) be a fully bifurcating phylogenetic tree of height , let be an alphabet with , and let denote the minimum number of leaves assigned a fixed state such that the Fitch set at the root is . For positive integers , the proposed recurrence is
Charleston and Steel's conjecture. For and ,
where in the first case and in the second case.
The conjecture generalizes the known binary-alphabet result that equals the th Fibonacci number. The source presents this as the general case proposed by M. Steel and M. Charleston; its resolution is not established by the supplied context.
References
Primary source
Lina Herbst and Mareike Fischer, “Ancestral sequence reconstruction with Maximum Parsimony”, arXiv:1702.01436 (2017).
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