Sturmfels–Sullivant degree-bound conjecture for the 3-Kimura model

Let TT be a tree, and let X(T,G)X(T,G) denote the variety associated to the group-based model for a finite group GG. For G=Z2×Z2G=\mathbb{Z}_2\times\mathbb{Z}_2, this is the 3-Kimura model, whose defining ideal consists of the phylogenetic invariants vanishing on the model.

Sturmfels–Sullivant's 3-Kimura conjecture. The ideal of the 3-Kimura model is generated in degree at most 44 for any tree TT.

This conjecture arose from numerical evidence for small trees and predicts a uniform degree bound for generators of the defining ideals. The statement is supported by the theorem that the projective scheme associated to the 3-Kimura model can be defined by an ideal generated in degree at most 44, but the conjecture as stated for the ideal of the model remains open in the supplied source.

Sources & referencesView supporting material

Primary source

Mateusz Michalek, “Constructive degree bounds for group-based models”, arXiv:1207.0930 (2013).

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