Diffeomorphism conjecture for pair frequencies in the RN+YpR model
Diffeomorphism conjecture for pair frequencies in the RN+YpR model
For , let and denote the corresponding pair-frequency functions in the RN+YpR model, and let be the stationary frequency of . Diffeomorphism conjecture. In the RN+YpR model, the functions and are diffeomorphisms from to . In the JC+CpG model the analogous assertion for is proved, whereas the RN+YpR assertion is supported by simulations and remains open.
Sources & referencesView supporting material
Primary source
Mikael Falconnet, “Phylogenetic distances for neighbour dependent substitution processes”, arXiv:0812.1962 (2010).
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